Jesse Shapiro

@bjesseshapiro

Macrobe qui aime les microbes

834 Folgt1.873 Follower620 Posts

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Jesse Shapiro@bjesseshapiro· 8d

Major career update: going back to being a postdoc and I am PSYCHED!

Screenshot of an email message indicating that, for HR purposes, I will be considered a postdoc during my sabbatical in Montpellier

Jesse Shapiro@bjesseshapiro· 9d

Independent replication from my own hand (right) and foot (left) in a little family science project

Two Petri dishes with colonies growing on LB agar. The left dish, from a foot print, has more visibly fuzzy fungi than the right, from finger prints.

Jesse Shapiro@bjesseshapiro· 10d

#MEEHubs2026 Montreal may have collectively lost the quiz but we are winning the poster session ;)

Photo of engaged, happy looking people gathered around posters in a futuristic blue corridor

Jesse Shapiro@bjesseshapiro· 11d

I think Montreal hub got the best lunch! #MEEHubs2026

Photo of a plate with falafel, hummus, pita, veggies etc

Jesse Shapiro@bjesseshapiro· 13d

I miss physical show tickets!

Photo of 4 old paper concert ticket stubs from the early 2000s

Jesse Shapiro@bjesseshapiro· 14d

Loving the mosaic sidewalk repair

Photo of a cracked sidewalk repaired with a colourful tile mosaic

Jesse Shapiro@bjesseshapiro· Jul 11

Must find a way to play these. Where is my MD player?!

Photo of 3 minidiscs with handwritten labels. They are show recordings of The Weakerthans and Neko Case from the early 2000s.

Jesse Shapiro@bjesseshapiro· Jul 8

Sabbatical year in France is HAPPENING !!

Slip of paper with text: “Vous venez d'obtenir un visa de long séjour valant titre de séjour vous permettant de séjourner en France, bienvenue !”

Jesse Shapiro@bjesseshapiro· Jun 24

Love the #worldcup flag combos that appear in Canada but I doubt would be viable in their home countries…

Photo of a car flying mini flags of both Colombia and Brazil

Jesse Shapiro@bjesseshapiro· Jun 20

Green roof at the local library is so cheerful on a rainy day

Photo of a rooftop covered in wildflowers and grasses. There are some buildings and an old church in the distance. It’s raining.

Jesse Shapiro@bjesseshapiro· Jun 9

Applied Math

Photo of a MatLab software box being used to prop open a door

Jesse Shapiro@bjesseshapiro· Jun 5

Re-upping for morning phage phriends. Hope you will find Brenna & Patrick's method useful! Here they are, with some other lab members, on a rock. They are rock stars.

A group of people standing in the woods on a sunny day on a large boulder, or on a wood ramp leading down from it.

Jesse Shapiro@bjesseshapiro· May 30

Hard to stay sad about the Habs with these vibes! Let’s go Victoire! Championnes!!

Jesse Shapiro@bjesseshapiro· May 28

The headline sounds silly but Jérôme is awesome and this is great news for science in Québec. Félicitations Jérôme, you rock!! montrealgazette.com/news/quebec-...

Jesse Shapiro@bjesseshapiro· May 22

Lab retreat: dumplings, hike, camp fire. My gang are the best!

Photo of a group of people standing around a camp fire at night

Photo of six people standing on a large boulder the size of a small boulder in the woods

Groups of people making dumplings around a table

Jesse Shapiro@bjesseshapiro· May 13

Naturally the poster session at the *Canadian* Society for Ecology and Evolution takes place on a hockey rink… @csee-sceemtgs.bsky.social #CSEE

Photo of a hockey arena with people milling about looking at posters on what would normally be the ice surface.

Jesse Shapiro@bjesseshapiro· May 11

#SCEECSEE20 here I come!

Photo of a backpack strapped to the front rack of a BIXI bike share bike in a bike lane

Photo of a VIA rail train at the platform

Jesse Shapiro@bjesseshapiro· May 10

#GoHabsGo

Jesse Shapiro@bjesseshapiro· May 9

And they said I didn’t need a front rack for my bike

Photo of a bike with a 1.5kg vanilla sheet cake strapped to the front

Jesse Shapiro@bjesseshapiro· May 8

Grant writing. You can tell which paragraphs were harder to write by measuring the cappuccino rings.

Photo of an empty cappuccino cup stained with coffee rings of different sizes

Jesse Shapiro@bjesseshapiro· Apr 23

Proud of my lab members for clear and transparent communication practices.

Screenshot of a computer cluster monitoring dashboard showing 92% of storage used, with a sticky note on it reading “BLAME NICOT.”

Jesse Shapiro@bjesseshapiro· Apr 17

Ready for spring hockey in Montreal

Photo of the boards of an outdoor hockey rink, with ice completely melted and hair grass left. Mont Royal looms in the background.

Jesse Shapiro@bjesseshapiro· Apr 14

It’s that time of year when even our Michelin-mentioned restaurants get on the Habs playoff wagon… and I’m here for it!

Restaurant scene with a Canadiens jersey displayed (Caulfield 22) displayed outside the kitchen

Jesse Shapiro@bjesseshapiro· Apr 13

Can we PLEASE bring back more handwritten notes in academic? Reprint requests, “hey, I liked your paper,” and little notes of congratulations like the one I just received that really made my day! Note to self: do more of this! Now to go find some university letterhead and a fountain pen…

Handwritten letter on university letterhead from an emeritus professor in the department congratulating me on my promotion.

Jesse Shapiro@bjesseshapiro· Apr 8

Thank you to this recommendation letter writer for breaking the monotony of reviewing grad school applications today

Screenshot of text reading:

Describe the applicant's weaknesses: Kryptonite

Jesse Shapiro@bjesseshapiro· Mar 26

Anyone else appreciate the irony of the infinity symbol in the new Doodle logo? (adding insult to injury of the endless calendar polls, their ad-filled website crashes my browser and sends my laptop fan into panic mode every time)

Jesse Shapiro@bjesseshapiro· Mar 21

The only brunch worth brunching

Photo taken from above of a wood table set with a bowl of bagels, cream cheese, and lox with capers, red onions, and sliced tomatoes.

Jesse Shapiro@bjesseshapiro· Mar 20

Awesome, stupid AI bubble means my students can’t have laptops

Email from McGill university purchasing department reading:

I wanted to update you on the situation shared in recent announcements to the McGill community related to the availability of key computer components. It has become increasingly difficult to purchase computer equipment. Manufacturers across the industry are facing significant constraints as increased demand from large cloud infrastructure providers that is affecting the global supply chain.

Impact on HP Orders
Due to these circumstances, HP has suspended the processing of orders for laptops and desktop computers. As a result, MicroAge-DIL (McGill’s supplier for HP computers) will be temporarily blocked as a supplier in McGill MarketPlace (MMP) until further notice. This a difficult situation that will require careful management and ongoing monitoring.

Alternate supplier options
Given the extent of this worldwide shortage, we are authorizing orders for new computers that would normally be placed with HP to instead be submitted to alternate suppliers such as Lenovo, Dell, or Insight (for Apple products). However, similar delays may occur with these suppliers as we have been advised that other manufacturers are also impacted. We can expect delivery and response times to be longer than usual.

Jesse Shapiro@bjesseshapiro· Mar 16

But (second result): Certain bacterial species have increased P:H ratios with ciprofloxacin exposure. For example, in the Bangladesh cohort, P:H ratios in Salmonella enterica went from 0.94 to 1.13 with CIP exposure. We found several other similar examples in the US cohort. 5/n

Species in the Bangladesh cohort with a significant increase in P:H ratio between patients exposed vs. not exposed to ciprofloxacin. Statistical significance was assessed with a Wilcoxon rank-sum test with Bonferroni multiple correction. Only species with corrected P ≤ 0.05 are shown.

Jesse Shapiro@bjesseshapiro· Mar 16

First result: there is no overall change in the P:H ratio (our measure of prophage induction) in either dataset, viewed across all phages and bacterial hosts 4/n